Blue Protein Standard, Broad Range, New England Biolabs

May 12, 2024

The b-chain eluted in the wash buffer. The gels were destained for several hours to overnight with deionized water. See all Prestained Protein Ladder reagents. 13/715, 812 filed Dec. 14, 2012, now U. Pat. After electrophoresis the gel was stained with SimplyBlue™ Safe Stain Coomassie G-250® protein stain (Invitrogen Corp., Carlsbad, Calif. ) according to the microwave protocol. 16A depicts a ruler aligned with a gel on which pre-labeled protein standards of the invention were electrophoresed for determining band width of the pre-labeled standards. Novex sharp prestained protein standard curve. Extracting the protein is performed as follows: 10 ml BugBuster® HT protein extraction reagent (Novagen, Madison, Wis., USA) with Complete Protease Inhibitor (Roche Applied Science, Indianapolis, Ind., USA) is added per every 1 g cell paste. For example, the migration of a labeled protein and the unlabeled form of the same protein can be compared on an electrophoresis gel, such as an acrylamide electrophoresis gel disclosed herein, for example a 4-12%, 4-16%, or 4-20% acrylamide gradient gel, in which the molecular weight of the labeled protein whose labeled and unlabeled form are being compared is greater than about 3. Optimal stability for up to 24 months. A selectively labeled protein can have more than one non-target amino acid.

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85 to obtain the width in millimeters. The protein(s) selectively labeled on cysteine can comprise an amino acid sequence that is not homologous to a known amino acid sequence of a naturally-occurring protein, or can be an amino acid sequence that has homology to the sequence of a naturally-occurring protein. Use at an assay dependent concentration. In some illustrative embodiments, a selectively labeled protein standard selectively labeled on lysine is depleted in or lacks residues of at least one of cysteine, histidine, or tryptophan. Fisher Scientific is always working to improve our content for you. 2A is a diagram of a nucleic acid construct (BH6mer ORF) having six copies of a truncated thioredoxin sequence lacking lysine separated by unique restriction sites. EagI-50 kd-10HIS-PmeI. Your feedback has been submitted. For buffer exchange, a Bio-Gel P-6 column is prepared having 10 column volumes to the sample volume. One or more proteins of a set of labeled protein standards can be selectively labeled, for example, on the sulfhydryl group of cysteine, on the primary amine of an N-terminal amino acid and/or the primary amine of lysine, on the secondary amine of the imidazoyl group of histidine or the indole ring of tryptophan, on the carboxyl groups of the C-terminal amino acid or of aspartate or glutamate, on the thioether of methionine, on the phenolate of tyrosine, or on the amidino group of asparagine. The seed flask is incubated with shaking (250 rpm) at 30 degrees C. Novex sharp prestained protein ladder. until the OD is between 1. In some embodiments, a protein standard selectively labeled on cysteine comprises one or more copies of an amino acid sequence having homology to an amino acid sequence of a naturally-occurring protein, in which the amino acid sequence homologous to a sequence of a naturally-occurring protein has a reduced number of lysine residues relative to the sequence of the naturally-occurring protein. In some embodiments, a selectively labeled protein is labeled on a first amino acid and includes an amino acid sequence having at least 80% homology to at least 40 contiguous amino acids of a naturally-occurring protein, in which the sequence having homology to the naturally-occurring protein has fewer residues of a second amino acid than the sequence of the naturally-occurring protein to which it is homologous. Calculation of Band Widths of Electophoresed Proteins of a Pre-Labeled Protein Standard Set.

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This application incorporates by reference a Sequence Listing submitted with this application as text file IVGN created on Jul. In some preferred embodiments of the invention, a protein used as a pre-labeled molecular weight standard includes one or more copies of an amino acid sequence derived from a thioredoxin sequence. Accurate - sharp bands for the accurate estimation of molecular weight. 12/263, 672 filed Nov. 3, 2008 (abandoned), which is a continuation of U. 1 D3 which had been also digested with XhoI and PmeI. 1-2 Pme, Clone B6-9 and renamed pTrc 110 kd (FIG. Novex sharp prestained protein standard range. The BenchMark™ 80 kDa protein standard (Invitrogen Corp., Carlsbad, Calif. 6, 703, 484) was labeled for use as the 80 kDa standard of the pre-labeled marker set. Then 50% of the target final volume of 2×Sample Buffer (130 mM Tris pH=6.

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After the expression period 1 ml of the cell cultures were centrifuged at 5000×g for 5 minutes. In some preferred embodiments of a pre-labeled protein standard set, at least three, at least four, at least five, at least six, at least seven, at least eight, at least nine, or at least ten proteins labeled on a first amino acid have between one and ten residues of a first amino acid per 10 kDa, such as between two and seven residues of a first amino acid, such as between three and five residues of a first amino acid, such as between 3. Blue Protein Standard, Broad Range, New England Biolabs. The gel purified vector was ligated with TA clone 50. PCR colony screening identified 11/80 clones containing the LacZ insert and expression screening identified 5/11 clones having the LacZ insert in the correct orientation.

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In another embodiment, the method includes: providing a pre-labeled protein standard set to a customer, in which the pre-labeled protein standard set comprises from five to twelve labeled proteins, and at least five of the labeled protein are labeled on cysteine and lack lysine residues, and the at least five labeled protein have the same ratio of cysteine residues to molecular weight. In some preferred embodiments, the two or more labeled proteins are comprise a labeling compound bound to a first amino acid and comprise one or more copies of an amino acid sequence of or having homology to an amino acid sequence of a naturally-occurring protein, in which the amino acid sequences of the labeled proteins lacks residues of a second amino acid that can react with the labeling compound. 14 shows that the pre-labeled protein standard set that includes five proteins labeled on cysteine and lacking lysine has twelve bands that produce sharp bands that migrate substantially the same as their unlabeled counterparts. 10 μl 400 mM TBP (tributhylphosphine) in isopropanol was added and the protein sample was vortexed for 10-15 seconds. The cell media is discarded and 2.

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In the present example, sequences lacking cysteine can optionally be analyzed for the frequency of these amino acids in the sequence as well. In these embodiments, preferably at least lysine is a non-target amino acid, since the reactivity of the primary amine of lysine is greater than that of the indoyl or imidazole amines of tryptophan or histidine, and thus lysine contributes more significantly to side reactions when conjugating a compound to cysteine. The BenchMark™ protein standard stock solutions were labeled at constant concentration (the ODs specified in the protocols). In some aspects, a pre-labeled protein standard set can include one or more proteins made, at least in part, by synthetic methods, such as chemical synthesis. 11/781, 251 filed Jul. 5 cm from the loading site and migration of a protein calculated to be about 10 kDa and the migration of a protein calculated to about 80 kDa are at least 3. The flow rate is stopped and the column is incubated for 1 hour at room temperature. All publications, patents and patent applications mentioned in this specification are indicative of the level of skill of those skilled in the art to which this invention pertains, and are herein incorporated by reference to the same extent as if each individual publication, patent or patent application was specifically and individually indicated to be incorporated by reference. Biozol Catalog Number:||BZL-JB-EPL-2500|.

Novex Sharp Prestained Protein Standard Version

The sample is left to cool down to room temperature. In many cases, this requires that one or more labeled proteins will be "overloaded" in a gel lane with respect to protein amount to achieve a desirable intensity for the resulting band on an electrophoresis gel. CROSS-REFERENCE TO RELATED APPLICATIONS. CACACAGGAAACAGCTATGA. The gels can be "mini gels" having lengths of 10 cm or less, such as, for example, gels 8 cm in length, or can be more than 10 cm in length, for example 12 cm, 15, cm, 20 cm or greater in length, in which the dye front at the end of the electrophoresis period has migrated at least 80% the length of the gel. 150 mls of the seed flask culture is then transferred to a 7 liter fermentor that contains 5 liters of rich media made as for the seed culture.

Novex Sharp Prestained Protein Standard Edition

Materials and Equipment. 160 and 260 kDa purification. The sample is run through the column and fractions are monitored using 280 nm detection. The cells are re-suspended in the lysis reagent by vortexing. The reaction was allowed to stir for 2 hours and while the pH was monitored.

5 to 260 kDa and is supplied in a ready-to-use format for direct loading onto gels; no need to heat, reduce, or add sample buffer prior to use. Fluorophores may contain substitutents that alter the solubility, spectral properties or physical properties of the fluorophore. The first amino acid can in yet further embodiments be methionine and the second amino acid can be one or more of cysteine, lysine, histidine, tyrosine, or tryptophan. 1-10 mg/mL at room temperature or below.

Population genetic and biophysical evidences reveal that purifying selection shapes the genetic landscape of Plasmodium falciparum RH ligands in Chhattisgarh and West Bengal, India. 14B shows the same set of markers in unlabeled form electrophoresed on a 4-12% Bis-Tris gel with MES running buffer. With the solution is stirring, sodium hydroxide was added dropwise to the stirred the solution until the pH is 10. REFERENCE TO A SEQUENCE LISTING.

In some embodiments, the invention provides pre-labeled molecular weight standard sets in which three, four, five, six, seven, eight, nine, ten, eleven, twelve, thirteen, fourteen, fifteen, or more of the labeled proteins of the set differ in size from one another by molecular weight increments that are multiples of 5 kDa, 10 kDa, 20 kDa, or 50 kDa. Two, three, four, five, six, seven, eight, nine, ten, eleven, twelve, thirteen, fourteen, fifteen, sixteen, seventeen, eighteen, nineteen, twenty, or more copies of the nucleic acid sequence encoding a truncated thioredoxin can be assembled together to make a recombinant protein having multiple copies of a truncated thioredoxin sequence. 8 kDa, so that the labeling compounds do not substantially alter separation rates of the proteins in electrophoresis or chromatography, for example. As used herein, the term "protein" encompasses peptides. The sequence-verified Thio repeat ORF insert (BH6mer ORF) from BlueHeron® Biotechnology (FIG. 5 µl per well for general western transferring. An unlabeled standard set comprising the same proteins as the pre-labeled set was also formulated. Please use the form below to provide feedback related to the content on this product. In some embodiments, a selectively labeled protein of the invention lacks residues of a second amino acid that can react with a labeling compound.